miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|27405692|gb|CA918762.1|CA918762 AAATATTGCATATACATAATATAGCACATTAATATTACCACCATCTTAAATATTTTGCTAATGAAAATAAAGTAATTAGC
TTGATTTCACTTGAATTAATAAAAAAGTATTGGTAATTAGGGCTTGCAAATACTAGTTCATCATGGCTTATCTAGCATAC
ATTTTATTCAGGAATAATGAAGTATAGCATCATGAGCAATCAGCCTTGGTAGGTTTTTGAGCAGATTGACTGCTCATGAT
ATTATATCAATTTCCATGAATTTAATTACCTATATGCATGCTAGAATATATTAATATATTTTTTTTTTTACTAAAGCATA
TATTAATATCTATATATGCTGCCCCATTAATAATTTAAATTTGGTCTCTACCGAAAGCCTCCTCCTAGGGCAGGTGCCCA
ATAATCAGCTCCATTGTCATTCCCAACTTGTAGTGTACATGACACTGGAACAAGACACAAACCTCTACTCTTTAGGTCCT
TCTTTGGTTCTTCTTGAGAAACCTCTTCAGCTGCTTTCCTCTTCAAGCCATTTTCATTTAGGAGCTGACCAGGGTCTTCA
GGGAATAAACAATTATTCTCTCCTTGAATTGATTGTGGCTGCCTTGTATTTCCTGATCCATTGCTCAAGTATGGTAAGCT
AAGAGCCCTCATTTGACTCTGAAGGAATCTGATGTACCAATAGCTTCTAACAGACAGAAGCTGTGTCAGT




Most similar to sp|Q8S3D1|BH068_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
           thaliana GN=BHLH68 PE=2 SV=2
          Length = 407

 Score =  140 bits (352), Expect = 1e-32
 Identities = 68/105 (64%), Positives = 81/105 (77%), Gaps = 7/105 (6%)
 Frame = -2

Query: 676 YIRFLQSQMRALSLPYL-SNGSGNTRQPQSIQGENNCLFPEDPGQLLNENGLKRKAAEEV 500
           YIRFLQSQ+ ALS PY  +  SGN R  Q +QG+ +C+FPEDPGQL+N+  +KR+ A   
Sbjct: 298 YIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSS 357

Query: 499 S------QEEPKKDLKSRGLCLVPVSCTLQVGNDNGADYWAPALG 383
           S       EEPKKDL+SRGLCLVP+SCTLQVG+DNGADYWAPALG
Sbjct: 358 STDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALG 402